[Lin64] Monolix Suite 2024R1

Create Date: 26 March 2024

File Size: 252.83 MB

Minimum system requirements

Required libraries (even for GUI-less usage):
- [Ubuntu ]: g++, libxcb-xinerama0 libpcre2-16-0 libxcb-cursor0, libcurl4, r-base-core
- [ RHEL (Red Hat Enterprise Linux) ]: gcc-c++, libX11-xcb xcb-util-wm xcb-util-image xcb-util-keysyms xcb-util-renderutil libxkbcommon-x11 libglvnd-glx, libglvnd-opengl pcre2-utf16 libXi libxkbfile libglvnd-egl, libglvnd-opengl pcre2-utf16 xcb-util-cursor (xcb-util-cursor available via EPEL (Extra Packages for Enterprise Linux), see here), R-core-devel

Read details on installing dependencies

ubuntu 20.04 desktop (basic install)

Bash commands to install dependencies required to use the GUI (including installer and license):

CODE

sudo apt install libxcb-xinerama0
sudo apt install g++
sudo apt install libpcre2-16-0
sudo apt install libcurl4
sudo apt install libxcb-cursor0

Bash command to install dependencies required to use the lixoftConnectors R package:

CODE

sudo apt install r-base-core

R command to install R dependencies required to use the lixoftConnectors R package:

CODE

install.packages(c("RJSONIO", "ggplot2", "gridExtra", "gtable"))

ubuntu 22.04 desktop (basic install)

same as 20.04, without libcurl4

red hat 8 (server with GUI)

Bash commands to install dependencies required to use the GUI (including installer and license):

CODE

sudo dnf install xcb-util-wm
sudo dnf install xcb-util-image
sudo dnf install xcb-util-keysyms
sudo dnf install xcb-util-renderutil
sudo dnf install gcc-c++
sudo dnf install pcre2-utf16
sudo dnf install xcb-util-cursor

note: xcb-util-cursor is in EPEL, it needs to be enabled first (https://docs.fedoraproject.org/en-US/epel/#_rhel_8 )

Bash command to install dependencies required to use the lixoftConnectors R package :

CODE

sudo dnf install R-core-devel

R command to install dependencies required to use the lixoftConnectors R package:

CODE

install.packages(c("RJSONIO", "ggplot2", "gridExtra", "gtable"))

red hat 8 (starting from minimal install)

Bash commands to install dependencies required to use the installer (both graphical and command-line):

CODE

sudo dnf install libX11-xcb
sudo dnf install xcb-util-wm
sudo dnf install xcb-util-image
sudo dnf install xcb-util-keysyms
sudo dnf install xcb-util-renderutil
sudo dnf install libxkbcommon-x11
sudo dnf install libglvnd-glx

Bash command to install g++ (g++ is needed for GUI installer, and will be needed anyway for plugins during softs' execution):

CODE

sudo dnf install gcc-c++

Bash commands to install dependencies required to use the no-gui mode (running MonolixSuite from commandline, without opening the GUI):

CODE

sudo dnf install libglvnd-opengl sudo dnf install libXi sudo dnf install libxkbfile sudo dnf install libglvnd-egl sudo dnf install pcre2-utf16

Bash command to activate the license in no-gui mode: <install-folder>/lib/licenseActivate --key xxxx-xxxx-xxxx-xxxx

Bash commands to install dependencies required to open the GUI (gui mode):

install graphical interface, e.g. gnome: sudo dnf groupinstall 'GNOME'
(then switch using sudo systemctl start graphical.target)
then:

CODE

sudo dnf install libglvnd-opengl
sudo dnf install pcre2-utf16
sudo dnf install xcb-util-cursor  # <-- not present in no-gui mode

note: again, xcb-util-cursor is available via EPEL (Extra Packages for Enterprise Linux), see https://docs.fedoraproject.org/en-US/epel/#_rhel_8

Installing dependencies required to use the lixoftConnectors R package: as above for red hat 8 server with GUI
note: R is available via EPEL

Architecture: 64 bits
Operating system: CentOS Stream 8, CentOS Stream 9, Ubuntu 20.04, Ubuntu 22.04, RHEL 8, RHEL 9, OpenSUSE Leap 15.5.
2GB RAM or above
gcc 4.8 or above
Optimally standard screen resolution not less than 800x600 pixels is recommended.

Installation steps

The file monolixSuite2024R1 is an executable. Depending on your operating system and settings it may open directly or not. If the installer does not open when clicking on it, you need to allow its execution as executable first. On Ubuntu, this can for instance be done with:
- Right click on the installer > Properties > Permissions and select "Allow executing file as program"
- In the command line, go to the directory containing the installer with "cd /path/to/installer" and then type "chmod +x monolixSuite2024R1"
Double click on the installer and follow the steps in the pop-up window.

Silent installation

The installation can be launched in silent mode, more details here.

License and activation

PKanalix, Monolix and Simulx require an activation key. Please go to this page if you do not have your license key yet.

Running

The user can also go to <InstallationMenu MonolixSuite2024R1>/bin ($HOME/Lixoft/MonlixSuite2024R1/bin by default) to access to the .bat for Datxplore, PKanalix, Monolix, and Simulx.
To see if everything is well installed, you can see here.

Possible troubleshooting

To troubleshoot download, installation, launch or run issues, check the troubleshooting page.