getIndividualElements
[Simulx] Get individual parameters elements
Get the list of all available individual parameters elements for the simulation. To use one of these elements in simulation, please add it to a simulation group with setGroupElement.
Usage
getIndividualElements()Details
Individual parameters elements can be defined with defineIndividualElement, or created by importing a Monolix or PKanalix project. Elements defined are created in the background and saved with the Simulx project if calling .saveProject. They can be deleted with deleteElement
Each element is a list of
| "inputType" | (character) | Type of input definition: can be "manual" or "external". |
| "file" | (list) | if the inputType is external, list with path to the file and sheet in the excel (if relevant) . NULL else wise. |
| "data" | (data.frame) | Values of the element. |
If the Simulx project was created from a model file, an individual element IndivParameters is created with all values equal 1.
If the Simulx project was created by importing or exporting a Monolix project, the following individual elements are created:
mlx_IndivInit is created with a vector of initial population parameters if the population parameters were not estimated.
mlx_PopIndiv is created with a vector of estimated population parameters (without the covariate(s) impact(s)) if the population parameters were estimated.
mlx_PopIndivCov is created with a table of estimated population parameters with covariate impact if the population parameters were estimated.
mlx_EBEs is created with a table of estimated EBEs if the EBEs were estimated.
mlx_CondMean is created with a table of estimated conditional mean for each individual if the conditional distribution task was run.
mlx_CondDistSample is created with a table including the first sample from the conditional distribution for each individual if the conditional distribution task was run.
If the Simulx project was created by importing or exporting a PKanalix project, the following individual elements are created:
an individual element pkx_IndivInit is created with a vector of initial parameters if the CA task has not run.
an individual element pkx_Indiv is created with a table of individual parameters estimated in PKanalix if the CA task has run with the method "individual fit".
an individual element pkx_IndivPooled is created with a vector of parameters estimated in PKanalix if the CA task has run with the method "pooled fit".
an individual element pkx_IndivGeoMean is created with a vector of individual parameters corresponding to the geometric mean of individual parameters estimated in PKanalix if the CA task has run with the method "individual fit".