The following page describes all the parameters computed in the non compartmental analysis.
Parameters related to λz
|
PKANALIX NAME |
DEFAULT ALIAS |
PKPARMCD CDISC |
UNITS |
DESCRIPTION |
FORMULA |
|---|---|---|---|---|---|
|
Rsq |
R squared |
R2 |
unitless |
Goodness of fit statistic for the λz regression |
Rsq = 1 - sum(log(Conc) - pred) / sum(log(Conc)-mean(log(Conc))) |
|
Rsq_adjusted |
adjusted R squared |
R2ADJ |
unitless |
Goodness of fit statistic for the λz regression, adjusted for the number of points |
Rsq_adjusted = 1 - (1 - Rsq) * (No_points_lambda_z - 1) / (No_points_lambda_z - 2) |
|
Corr_XY |
Correlation |
CORRXY |
unitless |
Correlation between time (X) and log concentration (Y) for the points used in the estimation of λz |
Corr_XY = sqrt(Rsq) |
|
No_points_lambda_z |
Number of points |
LAMZNPT |
unitless |
Number of points considered in the λz regression |
_ |
|
Lambda_z |
kel |
LAMZ |
1/time |
First order rate constant associated with the terminal elimination phase for concentration data |
Obtained from the λz linear regression
|
|
Lambda_z_lower |
kel Lower |
LAMZLL |
time |
Lower limit on time for values to be included in the λz calculation |
_ |
|
Lambda_z_upper |
kel Upper |
LAMZUL |
time |
Upper limit on time for values to be included in the λz calculation |
_ |
|
HL_Lambda_z |
T1/2 |
LAMZHL |
time |
Terminal half-life |
HL_Lambda_z = ln(2)/Lambda_z |
|
Lambda_z_intercept |
Intercept |
– |
unitless |
Intercept of the λz regression, i.e. value of the regression (in log-scale) at time 0. |
Obtained from the λz linear regression
|
|
Span |
Span |
– |
unitless |
Ratio between the sampling interval of the measurements used for the λz and the terminal half-life |
Span = (Lambda_z_upper - Lambda_z_lower) / HL_Lambda_z |
Parameters related to plasma/blood measurements
|
PKANALIX NAME |
DEFAULT ALIAS |
PKPARMCD CDISC |
UNITS |
DESCRIPTION |
FORMULA |
|---|---|---|---|---|---|
|
Tlag |
Tlag |
TLAG |
time |
Tlag is the time prior to the first measurable (non-zero) concentration. Tlag is 0 if the first observation after the last dose is not 0 or LOQ. The value is set to 0 for non extravascular input. |
[if intravenous]
|
|
T0 |
T0 |
|
time |
Time of the dose |
_ |
|
Dose |
Dose |
|
amount |
Amount of the dose |
_ |
|
N_Samples |
Number of samples |
– |
unitless |
Number of samples in the individuals (including zero or negative concentrations and BLQ not considered as “missing”) |
_ |
|
C0 |
C0 |
C0 |
amount/ volume |
If a PK profile does not contain an observation at dose time (C0), the following value is added
|
|
|
Tmax |
Tmax |
TMAX |
time |
Time of maximum observed concentration.
|
[For non-steady-state data]
|
|
Cmax |
Cmax |
CMAX |
amount/ volume |
Maximum observed concentration, occurring at Tmax. |
[For non-steady-state data]
|
|
Cmax_D |
Cmax/Dose |
CMAXD |
1/volume |
Maximum observed concentration divided by dose. |
Cmax_D = Cmax/Dose |
|
Tlast |
Tlast |
TLST |
time |
Last time point with measurable concentration |
|
|
Clast |
Clast |
CLST |
amount/ volume |
Concentration of last time point with measurable concentration |
|
|
AUClast |
AUC0-tlast |
AUCLST |
time⋅amount/volume |
Area under the curve from the time of dosing to the last measurable positive concentration. The calculation depends on the Integral method setting. |
See |
|
AUClast_D |
AUC0-tlast/Dose |
AUCLSTD |
time/volume |
Area under the curve from the time of dosing to the last measurable concentration divided by the dose. |
AUClast_D = AUClast/Dose |
|
AUMClast |
AUMC0-tlast |
AUMCLST |
time2⋅amount/volume |
Area under the moment curve (area under the curve of the product of concentration and time versus time) from the time of dosing to the last measurable concentration. |
See “AUC calculation” for details |
|
MRTlast |
MRTlast |
MRTIVLST |
time |
[if intravascular] Mean residence time from the time of dosing to the time of the last measurable concentration, for a substance administered by intravascular dosing.
|
|
|
MRTlast |
MRTlast |
MRTEVLST |
time |
[if extravascular] Mean residence time from the time of dosing to the time of the last measurable concentration for a substance administered by extravascular dosing.
|
|
|
AUCall |
AUCall |
AUCALL |
time⋅amount/volume |
Area under the curve from the time of dosing to the time of the last observation. |
See “AUC calculation” for details. If the last concentration is positive AUClast=AUCall.
|
|
AUCINF_obs |
AUC0-inf |
AUCIFO |
time⋅amount/volume |
AUC from Dosing_time extrapolated to infinity, based on the last observed concentration.
|
|
|
AUCINF_D_obs |
AUC0-inf, pred |
AUCIFOD |
time/volume |
AUCINF_obs divided by dose
|
|
|
AUC_PerCentExtrap_obs |
% extrapolated AUC |
AUCPEO |
% |
Percentage of AUCINF_obs due to extrapolation from Tlast to infinity.
|
|
|
AUC_PerCentBack_Ext_obs |
% AUC backextrapolated |
AUCPBEO |
% |
Applies only for intravascular bolus dosing. the percentage of AUCINF_obs that was due to back extrapolation to estimate C(0). |
|
|
AUMCINF_obs |
AUMC0-inf |
AUMCIFO |
time2⋅amount/volume |
Area under the first moment curve to infinity using observed Clast
|
|
|
AUMC_PerCentExtrap_obs |
% extrapolated AUMC |
AUMCPEO |
% |
Extrapolated (% or total) area under the first moment curve to infinity using observed Clast
|
|
|
MRTINF_obs |
MRT0-inf |
MRTIVIFO |
time |
[if intravascular] Mean Residence Time extrapolated to infinity for a substance administered by intravascular dosing using observed Clast
|
|
|
MRTINF_obs |
|
MRTEVIFO |
time |
[if extravascular] Mean Residence Time extrapolated to infinity for a substance administered by extravascular dosing using observed Clast
|
|
|
Vz_F_obs |
Vd/F |
VZFO |
volume |
[if extravascular] Volume of distribution associated with the terminal phase divided by F (bioavailability)
|
|
|
Cl_F_obs |
CL/F |
CLFO |
volume/time |
[if extravascular] Clearance over F (based on observed Clast)
|
|
|
Vz_obs |
Vd |
VZO |
volume |
[if intravascular] Volume of distribution associated with the terminal phase
|
|
|
Cl_obs |
CL |
CLO |
volume/time |
[if intravascular] Clearance (based on observed Clast)
|
|
|
Vss_obs |
Vss |
VSSO |
volume |
[if intravascular] An estimate of the volume of distribution at steady state based last observed concentration.
|
|
|
Clast_pred |
Ctlast |
– |
amount/volume |
Clast_pred = exp(Lambda_z_intercept- Lambda_z* Tlast)
|
|
|
AUCINF_pred |
AUC0-inf, pred |
AUCIFP |
time⋅amount/volume |
Area under the curve from the dose time extrapolated to infinity, based on the last predicted concentration, i.e., concentration at the final observation time estimated using the linear regression performed to estimate λz.
|
|
|
AUCINF_D_pred |
AUC0-inf, pred/Dose |
AUCIFPD |
time/volume |
AUCINF_pred divided by dose
|
|
|
AUC_PerCentExtrap_pred |
% extrapolated AUCpred |
AUCPEP |
% |
Percentage of AUCINF_pred due to extrapolation from Tlast to infinity
|
|
|
AUC_PerCentBack_Ext_pred |
% AUC backextrapolatedpred |
AUCPBEP |
% |
Applies only for intravascular bolus dosing. The percentage of AUCINF_pred that was due to back extrapolation to estimate C(0). |
|
|
AUMCINF_pred |
AUMC0-inf, pred |
AUMCIFP |
time2⋅amount/volume |
Area under the first moment curve to infinity using predicted Clast
|
|
|
AUMC_PerCentExtrap_pred |
% extrapolated AUMCpred |
AUMCPEP |
% |
Extrapolated (% or total) area under the first moment curve to infinity using predicted Clast
|
|
|
MRTINF_pred |
MRT0-inf, pred |
MRTIVIFP |
time |
[if intravascular] Mean Residence Time extrapolated to infinity for a substance administered by intravascular dosing using predicted Clast |
|
|
MRTINF_pred |
|
MRTEVIFP |
time |
[if extravascular] Mean Residence Time extrapolated to infinity for a substance administered by extravascular dosing using predicted Clast |
|
|
Vz_F_pred |
Vd, pred/F |
VZFP |
volume |
[if extravascular] Volume of distribution associated with the terminal phase divided by F (bioavailability)
|
|
|
Cl_F_pred |
CL/Fpred |
CLFP |
volume/time |
[if extravascular] Clearance over F (using predicted Clast)
|
|
|
Vz_pred |
Vd,pred |
VZP |
volume |
[if intravascular] Volume of distribution associated with the terminal phas
|
|
|
Cl_pred |
CLpred |
CLP |
volume/time |
[if intravascular] Clearance (using predicted Clast)
|
|
|
Vss_pred |
Vss, pred |
VSSP |
volume |
[if intravascular] An estimate of the volume of distribution at steady state based on the last predicted concentration.
|
|
|
AUC_T1_T2 |
AUCt1-t2 |
AUCINT |
time⋅amount/volume |
AUC from T1 to T2 (partial AUC) |
|
|
AUC_T1_T2_D |
AUCt1-t2 /Dose |
AUCINTD |
time/volume |
AUC from T1 to T2 (partial AUC) divided by Dose |
|
|
CAVG_T1_T2 |
Cavg t1-t2 |
CAVGINT |
amount/volume |
Average concentration from T1 to T2 |
|
Parameters related to plasma/blood measurements specific to steady state dosing regimen
In the case of repeated doses, dedicated parameters are used to define the steady state parameters and some specific formula should be considered for the clearance and the volume for example. Notice that all the calculation dedicated to the area under the first moment curve (AUMC) are not relevant.
|
PKANALIX NAME |
DEFAULT ALIAS |
PKPARMCD CDISC |
UNITS |
DESCRIPTION |
|---|---|---|---|---|
|
Tau |
Tau |
– |
time |
The (assumed equal) dosing interval for steady-state data. |
|
Ctau |
Ctau |
CTAU |
amount/volume |
Concentration at end of dosing interval.
|
|
Ctrough |
Ctrough |
CTROUGH |
amount/volume |
Concentration at end of dosing interval.
|
|
AUC_TAU |
AUCtau |
AUCTAU |
time⋅amount/volume |
The area under the curve (AUC) for the defined interval between doses (TAU). The calculation depends on the Integral method setting. |
|
AUC_TAU_D |
AUCtau/Dose |
AUCTAUD |
time/volume |
The area under the curve (AUC) for the defined interval between doses (TAU) divided by the dose.
|
|
AUC_TAU_PerCentExtrap |
% extrapolated AUCtau |
– |
% |
Percentage of AUC due to extrapolation in steady state. AUC_TAU_%Extrap = 100*(AUC [Tlast, tau] if Tlast<=tau)/AUC_TAU; |
|
AUMC_TAU |
AUMCtau |
AUMCTAU |
time2⋅amount/volume |
The area under the first moment curve (AUMC) for the defined interval between doses (TAU). |
|
Vz_F |
Vd/F or Vd, SS/F |
VZFTAU |
volume |
[if extravascular] The volume of distribution associated with the terminal slope following extravascular administration divided by the fraction of dose absorbed, calculated using AUC_TAU.
|
|
Vz |
Vd or Vd, SS |
VZTAU |
volume |
[if intravascular] The volume of distribution associated with the terminal slope following intravascular administration, calculated using AUC_TAU.
|
|
CLss_F |
CLss/F |
CLFTAU |
volume/time |
[if extravascular] The total body clearance for extravascular administration divided by the fraction of dose absorbed, calculated using AUC_TAU .
|
|
CLss |
CLss |
CLTAU |
volume/time |
[if intravascular] The total body clearance for intravascular administration, calculated using AUC_TAU.
|
|
Cavg |
Cavg |
CAVG |
amount/volume |
AUCTAU divided by Tau.
|
|
FluctuationPerCent |
(Cmax-Cmin)/Cavg % |
FLUCP |
% |
The difference between Cmin and Cmax standardized to Cavg, between dose time and Tau.
|
|
FluctuationPerCent_Tau |
(Cmax-Ctau)/Cavg % |
– |
% |
The difference between Ctau and Cmax standardized to Cavg, between dose time and Tau.
|
|
Accumulation_Index |
Accumulation index |
AILAMZ |
unitless |
Theoretical accumulation ratio: Predicted accumulation ratio for area under the curve (AUC) calculated using the Lambda z estimated from single dose data.
|
|
Swing |
(Cmax-Cmin)/Cmin |
– |
unitless |
The degree of fluctuation over one dosing interval at steady state
|
|
Swing_Tau |
(Cmax-Ctau)/Ctau |
– |
unitless |
Swing_Tau = (Cmax -Ctau)/Ctau |
|
Tmin |
Tmin |
TMIN |
time |
Time of minimum concentration sampled during a dosing interval. |
|
Cmin |
Cmin |
CMIN |
amount/volume |
Minimum observed concentration between dose time and dose time + Tau. |
|
Cmax |
Cmax or Cmax, SS |
CMAX |
amount/volume |
Maximum observed concentration between dose time and dose time + Tau. |
|
MRTINF_obs |
MRT0-inf or MRT0-inf, SS |
MRTIVIFO or MRTEVIFO |
time |
Mean Residence Time extrapolated to infinity using predicted Clast, calculated using AUC_TAU. |
Parameters related to urine measurements
|
PKANALIX NAME |
DEFAULT ALIAS |
PKPARMCD CDISC |
UNITS |
DESCRIPTION |
|---|---|---|---|---|
|
T0 |
T0 |
|
time |
Time of the last administered dose (assumed to be zero unless
|
|
Dose |
Dose |
– |
amount |
Amount of the dose |
|
N_Samples |
Number of samples |
– |
unitless |
Number of samples in the individuals. |
|
Tlag |
Tlag |
TLAG |
time |
Midpoint prior to the first measurable (non-zero) rate. |
|
Tmax_Rate |
Tmax |
ERTMAX |
time |
Midpoint of collection interval associated with the maximum observed excretion rate. |
|
Max_Rate |
Ratemax |
ERMAX |
amount/time |
Maximum observed excretion rate. |
|
Mid_Pt_last |
Last midpoint |
ERTLST |
time |
Midpoint of collection interval associated with Rate_last. |
|
Rate_last |
Ratelast |
ERLST |
amount/time |
Last measurable (positive) rate. |
|
AURC_last |
AURC0-tlast |
AURCLST |
amount |
Area under the urinary excretion rate curve from time 0 to the last
|
|
AURC_last_D |
AURC0-tlast /Dose |
AURCLSTD |
unitless |
The area under the urinary excretion rate curve (AURC) from time zero to the last measurable rate, divided by the dose. |
|
Vol_UR |
Sum of urine volume |
VOLPK |
volume |
Sum of Urine Volumes |
|
Amount_Recovered |
Amount recovered |
|
amount |
Cumulative amount eliminated. |
|
Percent_Recovered |
% recovered |
|
% |
100*Amount_Recovered/Dose |
|
AURC_all |
AURCall |
AURCALL |
amount |
Area under the urinary excretion rate curve from time 0 to the last rate. This equals AURC_last if the last rate is measurable. |
|
AURC_INF_obs |
AURC0-inf |
AURCIFO |
amount |
Area under the urinary excretion rate curve extrapolated to infinity, based on the last observed excretion rate. |
|
AURC_PerCentExtrap_obs |
% extrapolated AURC |
AURCPEO |
% |
Percent of AURC_INF_obs that is extrapolated |
|
AURC_INF_pred |
AURC0-inf, pred |
AURCIFP |
amount |
Area under the urinary excretion rate curve extrapolated to infinity, based on the last predicted excretion rate. |
|
AURC_PerCentExtrap_pred |
% extrapolated AURCpred |
AURCPEP |
% |
Percent of AURC_INF_pred that is extrapolated |
|
AURC_T1_T2 |
AURCt1-t2 |
AURCINT |
amount |
The area under the urinary excretion rate curve (AURC) over the interval from T1 to T2. |
|
AURC_T1_T2_D |
AURCt1-t2/Dose |
AURCINTD |
unitless |
The area under the urinary excretion rate curve (AURC) over the interval from T1 to T2 divided by Dose |
|
Rate_last_pred |
Ratelast, pred |
– |
amount/time |
The values alpha and Lambda_z are those values found during the regression
|
Parameters related to sparse NCA
|
PKANALIX NAME |
DEFAULT ALIAS |
UNITS |
DESCRIPTION |
|---|---|---|---|
|
SE_Cmax |
SECmax |
amount/volume |
Sample standard error of the concentration values at Tmax (standard deviation of the y-values at time Tmax divided by the square root of the number of observations at Tmax) |
|
SE_AUClast |
SEAUClast |
time⋅amount/volume |
with
and
where:
|
|
SE_AUCall |
SEAUCall |
time⋅amount/volume |
Same as SE_AUClast with m = last observation time |
|
SE_Max_Rate |
SEMax_Rate |
amount/time |
Same as SE_Cmax with excretion rates |
|
SE_AURC_last |
SEAURC_last |
amount |
Same as SE_AUClast with excretion rates |
|
SE_AURC_all |
SEAURC_all |
amount |
Same as SE_AUCall with excretion rates |
SE_AUClast, SE_AUCall, SE_AURC_last, SE_AURC_all are available only if the integral method is “linear trapezoidal linear” or “linear trapezoidal linear/log” (because the formula is based on linear calculation of AUC).
Parameter renamings
Starting from the 2023 version of MonolixSuite, default parameter names used in results tables and plots in the graphical user interface and reports do not match the names present in the Name column of the tables above. The names that are used can be customized in the NCA parameters renamings section of Preferences. The section contains two columns:
-
Parameter – this column contains parameter names from the tables above,
-
Alias – this column contains parameter names used in the interface and the values in cells can be changed.
The Alias column is prefilled with default aliases. By clicking on an alias, PKanalix allows users to input characters. There are several options present, when in the input mode:
-
Undo
– reverse the last action,
-
Redo
– redo an undone action,
-
Subscript
– formats selected text and subsequently entered characters as subscript,
-
Superscript
– formats selected text and subsequently entered characters as superscript,
-
CF
– clears formatting of a selected text,
-
Cancel
– cancels the changes and restores the alias,
-
Accept
– accepts the changes (changes can be accepted by clicking anywhere in the interface as well).